CDS
| Accession Number | TCMCG066C21765 |
| gbkey | CDS |
| Protein Id | XP_034596944.1 |
| Location | join(40722153..40722815,40723534..40725059,40725418..40725559,40725661..40725768,40725940..40726152,40726239..40726349,40732568..40732762,40733306..40733480,40733594..40733631) |
| Gene | LOC117858067 |
| GeneID | 117858067 |
| Organism | Setaria viridis |
Protein
| Length | 1056aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034741053.1 |
| Definition | pumilio homolog 2-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Pumilio-family RNA binding repeat |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] |
| KEGG_ko |
ko:K17943
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0003676 [VIEW IN EMBL-EBI] GO:0003723 [VIEW IN EMBL-EBI] GO:0003729 [VIEW IN EMBL-EBI] GO:0003730 [VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] GO:0097159 [VIEW IN EMBL-EBI] GO:1901363 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGATGAGCGCCAGCGCCGTGGCGATGCGTGCGGAGATGGGCGGCGGCGGTGGGGAGGGAGAGCTGGAGGACGAGCTTGACGCGCTGCTTAGTTCCGGCGCCGGTGGTCAGCGGCGGCGCCCGGTAGACGCGGGCGAAAGGGAGCGGGAGCGGGAACTCAGCATGTTCAGGAGCGGGTCGGCGCCGCCGACCATAGAGGGTTCCCTGAACGCCATCAGCGGCCTGCTCCGCGGCGACGCGGAGGCTGCGGTGACGGCTGCCCCGATTCCTGTTGCTGAGGCGTTGAATGGGCATGGTGGCCTCCTCTCGGAGGAGGAGCTCCGAGCCGACCCAGCCTACCTGTCGTACTACTACTCTCACGGAAATCTGAACCCGCGGCTGCCGCCTCCGGTGCTGTCCAAGGAGGATTGGCGGTCAACCCAGCGCCTGAAAGCTGGGGTGGTTGGGGGGATTGGGGACAGGAGGAAGGTGGGGCAAGAGGACGCGGTACAGGGGACGGGGACTGCAGTGGGTAGGTCTCTATTTCCGCAGCATCCTGGTTCTGAGCAGGAGGAGGAAGCCAGGGTTGATGGTGGTGGTGCTGCTGAGTGGGTGGATGGTGGAGGGGATGGGCTCATTGGTTTATCGCTCGGGCGGCAGCGTAGCTTCGCGGATATCCTGCAGGACAATATTGGGCGCAGAACACCTACTTCAGAGCATCCCTCCCGTGCGGCCAGTCGCAATTCTTTTCTTGACAATCAAGAACCAGTGGATTCTGCTGAGAACCAATATTCTGTGCATACTGATATTTTGGAAGGTCATCATCCTGTTGGGAATGTGCAAAATGTCGGTGGTCGTCACAGTCTTAATGCATCCACATCTCAGACGTTTGCATCTATTCTGGGTTCATCTGTTTCCAGAAATGCTACACCAGATCCTCATTATGTTGCAAGGGTTCCTAGTCCTGGCCTTCCACCTGTTGGTGTTAGGATTACTTCCAATGAGAAGAAACTGAATTGCTCCTCTTCGCCATTCAACACTGTATCCTCAAAAGCAGTTGGGGCTGATGATATTTTATCTGCATTGTCAAGCATGAACTTATCAAAAGGTGGTACCTTGAATGGTAATAACAACATCAGTCGATCAAACTTTCAGAGAGGGACAAGTGATCAGCAGAAATTTTCTCTTGACTCACAAGCTGGAGCTGCCCAAGTCAATAATAAGCAGCATCCTGTGATGTTAGGAACTGATGATGAATATTTGGGTATGCCATCGATGTCACAACCATCTAATACTTCTTTTGCTGACGTTAACAACAGCATGGCTGGTTTAGCAGAGTTAAGAAATAGTACCAACACAAGATCAGATGGACATTTGGAAATGCAAAGATCTTCTACTTTATCTGCTCGTTCATATCAGAAGTCCCCATCATCTTCTAATGAAAGCCCGGGTGGTTCTCCAGCTCAACATCAGAATTTTGATGGTATAAATTCAGCCTTTTTGAACTATGGGCTTAGTGGATATCCACTCAGCCCAGGTTTGCCTTCTATGATTCCCCCTTTGTTTGAAAGTGCTGCTGCTGCATCTGCTATAGCTTCACTTGGTGCAGATTCAAGAAACCTTGGAAACAATATTTTAGCTTCACCTACGTTGAGCCTAACAGATGTTCATAACCTTGGTCGAGGTGGTAATCAAGCTCCCACAGGTCTTCAGTCTCCTCTTTCTGACCCGTTTTATGTCCAGTACTTGAAGGCAACGCAGTATGCAGCACAGGGAACTGGCAGCTATGGTGATCCTTCCTTGGAAAGAGGTTACATGGGTAACTCATATGGTAATTTAACTGCAGTTCAAAAAGCTTATATTGAAGCTTTGCTTCAGCAGCAGAAGCAATATGAAATGCCACTTTTAGGTAAATCAAACGCTTCAAATCATGGGTACTATGGCAATTTACCTTTTGGCATGGGCATGGCATACCCAGGAAGCCCATTGGGCAGTCCAGTTGCTTCTCCATCTGGTCCTGGCAGTCCACTAAGGCTTGGTGAGCGGAATCTGAGATTTCCTTCTAACTTAAGAAACTTGGGTGGATGGACCTCTGATCCAAGTGGCTACATGAATGAGAACTTTCCATCCTCACTTTTGGATGAGTTTAAAAGTAACAAGGCGAGAAGTTTTGAGCTTGCTGAGATCGCTGGGCATGTGGTTGAGTTTAGTGCTGACCAATATGGAAGCCGTTTCATACAGCAAAAACTCGAAACCGCAACAGTCGAGGAAAAGAACATGGTCTTCGAGGAGATCATGCCTCATGCACTATCATTGATGACTGATGTATTTGGAAATTATGTGGTACAGAAGTTTTTTGAGCATGGAAGCGCAGAACAACGGAGGGAGTTGGCTGATAAACTGTTTGGCCATGTATTAGCTCTCAGTCTTCAGATGTATGGATGCCGAGTTATCCAAAAGGCAATAGAGGTGGTTGATCTGGACCAGAAAACAAAGATGGTTACCGAGCTTGATGGTCATATCATGAAATGTGTACGTGATCAAAATGGAAACCATGTCATCCAGAAATGTATTGAACGTGTCCCAGAAGATTCTATTCAGTTTGTAATATCAACATTCTATGGTCATGTTGTTCCATTATCCACCCACCCTTACGGCTGCAGAGTCATTCAGAGAGTACTTGAACACTGTGCTGATCCAAAAACACAGCAAATAGTCATGGATGAGATATTGCAATCTGTATGCATGTTGGCACAGGATCAATACGGAAACTATGTTGTCCAGCATGTTTTGGAGCACGGGAAGCCTCACGAAAGATCCATCATTATTGAAAAATTAGCTGGACAGATCATTCAGATGAGCCAACAGAAATTTGCCTCGAATGTTGTTGAGAAGTGTCTGACATTTGGCGGACCTACAGAGCGAGAAGTTCTCATAAATGAAATGCTTGGAACCACTGATGAGAATGAGCCTCTACAGGCCATGATGAAGGATCAGTTTGGTAACTATGTTGTACAGAAGGTACTTGAGACTTGTGATGATCAGCAACGTGAGTTGATCCTGTCACGGGTAAAGGTCCACTTAAATGCTCTGAAGAAATATACATATGGGAAGCACATAGTTGCTCGTGTAGAGAAACTTGTTGCTGCTGGTGAGAGGAGGATTGGACTTCAATCACAAAATCCTTCTTGA |
| Protein: MMSASAVAMRAEMGGGGGEGELEDELDALLSSGAGGQRRRPVDAGERERERELSMFRSGSAPPTIEGSLNAISGLLRGDAEAAVTAAPIPVAEALNGHGGLLSEEELRADPAYLSYYYSHGNLNPRLPPPVLSKEDWRSTQRLKAGVVGGIGDRRKVGQEDAVQGTGTAVGRSLFPQHPGSEQEEEARVDGGGAAEWVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPTSEHPSRAASRNSFLDNQEPVDSAENQYSVHTDILEGHHPVGNVQNVGGRHSLNASTSQTFASILGSSVSRNATPDPHYVARVPSPGLPPVGVRITSNEKKLNCSSSPFNTVSSKAVGADDILSALSSMNLSKGGTLNGNNNISRSNFQRGTSDQQKFSLDSQAGAAQVNNKQHPVMLGTDDEYLGMPSMSQPSNTSFADVNNSMAGLAELRNSTNTRSDGHLEMQRSSTLSARSYQKSPSSSNESPGGSPAQHQNFDGINSAFLNYGLSGYPLSPGLPSMIPPLFESAAAASAIASLGADSRNLGNNILASPTLSLTDVHNLGRGGNQAPTGLQSPLSDPFYVQYLKATQYAAQGTGSYGDPSLERGYMGNSYGNLTAVQKAYIEALLQQQKQYEMPLLGKSNASNHGYYGNLPFGMGMAYPGSPLGSPVASPSGPGSPLRLGERNLRFPSNLRNLGGWTSDPSGYMNENFPSSLLDEFKSNKARSFELAEIAGHVVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAEQRRELADKLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMKCVRDQNGNHVIQKCIERVPEDSIQFVISTFYGHVVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPTEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIGLQSQNPS |